Stem-loop bmo-mir-3224

Accession

MI0014277

Description

Bombyx mori bmo-mir-3224 precursor miRNA

Sequence

1146 reads, 37.0 reads per million, 15 experiments

uggcgcaggaggagggacgguuacucccaUCAUCCUGGCCUUCUUGCGGUAGAccggacaccgccuaucaacggcggcgugguccuucccgcaauUGGCGCAGGAGAAUGGGCCGUcccucggccucgggca
..((.((((..(((((((((.....(((((..((((((((...((((((..((((..((.(((((.......))))).))))))....))))))..))).)))))..))))))))))))))..))).).)).

Structure

ug  g -   ag         uuacu     CA     -   UUC      --UA    gg  a     ua 
  gc c agg  gagggacgg     cccaU  UCCUG GCC   UUGCGG    GAcc  ac ccgcc  u
  || | |||  |||||||||     |||||  ||||| |||   ||||||    ||||  || |||||  c
  cg g ucc  cucccUGCC     GGGUA  AGGAC CGG   aacgcc    cugg  ug ggcgg  a
-a  g c   gg         -----     AG     G   -Uu      cuuc    --  c     ca 

Annotation confidence Medium

Genome context

dbj|BSVE01000030.1|: 2592786-2592917 [-]

Mature bmo-miR-3224-5p

• Accession: MIMAT0015405
• Description: Bombyx mori bmo-miR-3224-5p mature miRNA
• Sequence: 30 - UCAUCCUGGCCUUCUUGCGGUAGA - 53
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-3224-3p

• Accession: MIMAT0053226
• Description: Bombyx mori bmo-miR-3224-3p mature miRNA
• Sequence: 96 - UGGCGCAGGAGAAUGGGCCGU - 116
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415