Stem-loop bmo-mir-3226

Accession

MI0014280

Description

Bombyx mori bmo-mir-3226 precursor miRNA

Sequence

6 reads, 1.0 reads per million, 5 experiments

agaugacguagguguUCUAUUUUUCUACGGGAACUUCUCuacuaugaccggguucugacggagauugaacgucgggugagagggucggggagucguuuggugcgguagggcccuaaaaauauc
.((((...((((.((((((((...(((.(.((.((((((......((((....(((((((.........)))))))......)))))))))))).).)))...))))))))))))....))))

Structure

a    -acg    u        UUU   C G  A      uacuau    --gggu       gag 
 gaug    uagg guUCUAUU   CUA G GA CUUCUC      gacc      ucugacg   a
 ||||    |||| ||||||||   ||| | || ||||||      ||||      |||||||   u
 cuau    aucc cgggaugg   ggu u cu gagggg      cugg      gggcugc   u
-    aaaa    -        cgu   u g  -      ------    gagagu       aag 

Annotation confidence Not enough data

Genome context

dbj|BSVE01000018.1|: 10221673-10221795 [-]

Mature bmo-miR-3226-5p

• Accession: MIMAT0015408
• Description: Bombyx mori bmo-miR-3226-5p mature miRNA
• Sequence: 16 - UCUAUUUUUCUACGGGAACUUCUC - 39
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415