miRBase entry: bmo-mir-3228

Dead hairpin entry

Stem-loop bmo-mir-3228


Accession
MI0014282
Description
Bombyx mori bmo-mir-3228 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search
1 open access papers mention bmo-mir-3228
(1 sentences)

Sequence

3428 reads, 82.0 reads per million, 29 experiments
uauuugagcaccuUGAGAUCAAAUGUUGCUGUCCUUGGAUcuugaaguucugaauuuucaagaucuucagauucguggcuucgagcugUCAUUACUUGAGAUGGAGGAAUCU
.....((...((((.(..(((((((..(((..((.(((((((.((((.(((((....)).))).))))))))))).)).....)))...)))...))))..).))))..)).

Structure
uauuu  gca    G GA    ---   -UU   ---GU  U       u    u   -  a 
     ga   ccuU A  UCAA   AUG   GCU     CC UGGAUcu gaag ucu ga u
     ||   |||| |  ||||   |||   |||     || ||||||| |||| ||| ||  
     CU   GGAG U  AGUU   UAC   cga     gg gcuuaga cuuc aga cu u
----U  -AA    G AG    CAU   Ugu   gcuuc  u       -    u   a  u