miRBase entry: bmo-mir-3229

Dead hairpin entry

Stem-loop bmo-mir-3229


Accession
MI0014283
Description
Bombyx mori bmo-mir-3229 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

9523 reads, 172.0 reads per million, 34 experiments
uucaauuuuucguauuugccgguagcggguggauuuuuuaUGAUAUCUUUAAUUUCGCGGAUGUACCucuguuccagcugcgagauaaugugguaaaacuuuguaguaucuuccuUGAUACCGGAUAUUUGGAAUUGU
..(((((((..((((...((((((..(((.((((.((((((.((((.....(((((((((.((.((....))..)).))))))))).)))).)))))).........)))).)))...))))))))))..))))))).

Structure
uu       uc    uug      -gc   u    --------u      G    CUUUA         A  -U  C 
  caauuuu  guau   ccggua   ggg ggau         uuuuaU AUAU     AUUUCGCGG UG  AC u
  |||||||  ||||   ||||||   ||| ||||         |||||| ||||     ||||||||| ||  ||  
  GUUAAGG  UAUA   GGCCAU   ucc ucua         aaaaug ugua     uagagcguc ac  ug c
-U       UU    ---      AGU   u    ugauguuuc      g    ----a         g  cu  u