Stem-loop bmo-mir-3232

Accession

MI0014286

Description

Bombyx mori bmo-mir-3232 precursor miRNA

Sequence

2008 reads, 43.0 reads per million, 34 experiments

UGUGAUCUGUGACAAUCUGCuuUCAUAUUGUUUCUUAAUUAAACUGCucauugcuuucuguauugcucauuuguugaguaugugauaggguauuuugauugacuuuagauaguuugucuugguguuucuucacu
..........(((((...(((.((.((..(((....(((((((.((((((((((.........((((((.....)))))).))))).))))).))))))))))..)))).))))))))..((((......))))

Structure

------UGUGAUCUGU     UCU   u  A  UU   UCUU       C     -     uuucuguau      u 
                GACAA   GCu UC UA  GUU    AAUUAAA UGCuc auugc         ugcuca u
                |||||   ||| || ||  |||    ||||||| ||||| |||||         |||||| u
                cuguu   uga ag au  cag    uuaguuu auggg uagug         augagu g
ucacuucuuugugguu     ---   u  -  uu   ----       u     a     --------u      u 

Annotation confidence High

Genome context

dbj|BSVE01000007.1|: 11857542-11857675 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bmo-mir-3232

Mature bmo-miR-3232-5p

• Accession: MIMAT0053229
• Description: Bombyx mori bmo-miR-3232-5p mature miRNA
• Sequence: 1 - UGUGAUCUGUGACAAUCUGC - 20
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-3232-3p

• Accession: MIMAT0015414
• Description: Bombyx mori bmo-miR-3232-3p mature miRNA
• Sequence: 23 - UCAUAUUGUUUCUUAAUUAAACUGC - 47
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415