miRBase entry: bmo-mir-3232

Stem-loop bmo-mir-3232


Accession
MI0014286
Description
Bombyx mori bmo-mir-3232 precursor miRNA


Sequence

19 reads, 7 reads per million, 3 experiments
ugugaucugugacaaucugcuuUCAUAUUGUUUCUUAAUUAAACUGCucauugcuuucuguauugcucauuuguugaguaugugauaggguauuuugauugacuuuagauaguuugucuugguguuucuucacu
..........(((((...(((.((.((..(((....(((((((.((((((((((.........((((((.....)))))).))))).))))).))))))))))..)))).))))))))..((((......))))

Structure
------ugugaucugu     ucu   u  A  UU   UCUU       C     -     uuucuguau      u 
                gacaa   gcu UC UA  GUU    AAUUAAA UGCuc auugc         ugcuca u
                |||||   ||| || ||  |||    ||||||| ||||| |||||         |||||| u
                cuguu   uga ag au  cag    uuaguuu auggg uagug         augagu g
ucacuucuuugugguu     ---   u  -  uu   ----       u     a     --------u      u 


Annotation confidence Not enough data
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Genome context
NW_004581739.1: 206010-206143 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bmo-mir-3232
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bmo-miR-3232

Accession MIMAT0015414
Description Bombyx mori bmo-miR-3232 mature miRNA
Sequence 23 - UCAUAUUGUUUCUUAAUUAAACUGC - 47
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415