Stem-loop bmo-mir-3233

Accession

MI0014287

Description

Bombyx mori bmo-mir-3233 precursor miRNA

Sequence

4 reads, 1.0 reads per million, 4 experiments

aaugugccuuuugguUCUUCGUGUUCCAUUACUCUUACuauucuuauaauauaaucuuuuauaguuuaaauguuaaggguuucugaaacugaauuauaugaucagggcacgg
...((((((..(((((.((((.(((.((..(((((((.((((..((...(((((....)))))...)))))).)))))))...)).)))))))......)))))))))))..

Structure

aau      uu     -----C    U   C  -UU       C    cu  uaa     u 
   gugccu  ugguU      UUCG GUU CA   ACUCUUA uauu  ua   uauaa c
   ||||||  |||||      |||| ||| ||   ||||||| ||||  ||   |||||  
   cacggg  acuag      aagu caa gu   ugggaau guaa  au   auauu u
-gg      --     uauauu    -   a  cuu       u    --  uug     u 

Annotation confidence Not enough data

Genome context

dbj|BSVE01000024.1|: 11394741-11394852 [+]

Mature bmo-miR-3233-5p

• Accession: MIMAT0015415
• Description: Bombyx mori bmo-miR-3233-5p mature miRNA
• Sequence: 16 - UCUUCGUGUUCCAUUACUCUUAC - 38
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415