miRBase entry: bmo-mir-2808e

Dead hairpin entry

Stem-loop bmo-mir-2808e


Accession
MI0014289
Description
Bombyx mori bmo-mir-2808e precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search
1 open access papers mention bmo-mir-2808e
(2 sentences)

Sequence

9681 reads, 199.0 reads per million, 34 experiments
agcucacggggcucaaaccgaagugcuucGCAGAAUCUACCACCGGgucgguagcgcgacccacugagaagauccggugaguAACUCAGUGGGCUGUGUCUauggguua
((((((..((((.((..(((.((((((.(((.(.((((.(((..((((((......))))))..)).).)))).).)))))).)))...)))..)).)))).)))))).

Structure
-      cg    u  aa   --a   -   u   A A    A -  CC      gu 
 agcuca  gggc ca  ccg   agu gcu cGC G AUCU C CA  GGgucg  a
 ||||||  |||| ||  |||   ||| ||| ||| | |||| | ||  ||||||   
 uugggu  UCUG GU  GGU   UCA uga gug c uaga g gu  cccagc  g
a      -a    U  CG   GAC   A   -   g c    a a  ca      gc