Stem-loop bmo-mir-2808e

Accession

MI0014289

Description

Bombyx mori bmo-mir-2808e precursor miRNA

Literature search

1 open access papers mention bmo-mir-2808e
(2 sentences)

Sequence

9681 reads, 199.0 reads per million, 34 experiments

agcucacggggcucaaaccgaagugcuucGCAGAAUCUACCACCGGgucgguagcgcgacccacugagaagauccggugaguAACUCAGUGGGCUGUGUCUauggguua
((((((..((((.((..(((.((((((.(((.(.((((.(((..((((((......))))))..)).).)))).).)))))).)))...)))..)).)))).)))))).

Structure

-      cg    u  aa   --a   -   u   A A    A -  CC      gu 
 agcuca  gggc ca  ccg   agu gcu cGC G AUCU C CA  GGgucg  a
 ||||||  |||| ||  |||   ||| ||| ||| | |||| | ||  ||||||   
 uugggu  UCUG GU  GGU   UCA uga gug c uaga g gu  cccagc  g
a      -a    U  CG   GAC   A   -   g c    a a  ca      gc 

Annotation confidence Low

Genome context

dbj|BSVE01000003.1|: 14649995-14650103 [-]

Mature bmo-miR-2808e-5p

• Accession: MIMAT0053230
• Description: Bombyx mori bmo-miR-2808e-5p mature miRNA
• Sequence: 30 - GCAGAAUCUACCACCGG - 46
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-2808e-3p

• Accession: MIMAT0015417
• Description: Bombyx mori bmo-miR-2808e-3p mature miRNA
• Sequence: 83 - AACUCAGUGGGCUGUGUCU - 101
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415