miRBase entry: bmo-mir-3235

Stem-loop bmo-mir-3235


Accession
MI0014290
Description
Bombyx mori bmo-mir-3235 precursor miRNA


Sequence

74 reads, 18 reads per million, 3 experiments
ggcagggcgguaguaccuacccgugcggacucagaagaggucuuaccaccauaucuggucggUCCAACGUCUCGGGCCUCUACCUCgugg
..((.((.(((((......((((.(((((((((((.(.(((......))).).))))...)))))...))..))))...))))))).)).

Structure
gg  g  c     uaccua    -u  ---     ---    a a   cu 
  ca gg gguag      cccg  gc   ggacu   caga g ggu  u
  || || |||||      ||||  ||   |||||   |||| | |||   
  gu CU CCAUC      GGGC  UG   CCUgg   gucu u cca  a
-g  g  -     ---UCC    UC  CAA     cug    a a   cc 


Annotation confidence Not enough data
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Genome context
NW_004581762.1: 851545-851634 [+]

Database links

Mature bmo-miR-3235

Accession MIMAT0015418
Description Bombyx mori bmo-miR-3235 mature miRNA
Sequence 63 - UCCAACGUCUCGGGCCUCUACCUC - 86
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415