miRBase entry: bmo-mir-3238

Dead hairpin entry

Stem-loop bmo-mir-3238


Accession
MI0014293
Description
Bombyx mori bmo-mir-3238 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

79538 reads, 1846.0 reads per million, 34 experiments
aaagucaaaugaaucaugcauugacuacaugUUUGCCAUGAAAGAGCUUGGACGCCGAggcaaaauggcggacUACGUGGCUAUAAAAUAUGUUGUAGAugguauacaagaucaa
..................((((.((.((((((((((((((.........(..(((((........)))))..)..))))))....)))))))).)).))))..............

Structure
aaagucaaaugaaucaug    g  u        ----      AAAGAGCUU GA     Agg 
                  cauu ac acaugUUU    GCCAUG         G  CGCCG   c
                  |||| || ||||||||    ||||||         |  |||||    
                  guAG UG UGUAUAAA    CGGUGC         c  gcggu   a
----aacuagaacauaug    A  U        AUAU      -------AU ag     aaa