Stem-loop bmo-mir-3238

Accession

MI0014293

Description

Bombyx mori bmo-mir-3238 precursor miRNA

Sequence

79538 reads, 1846.0 reads per million, 34 experiments

aaagucaaaugaaucaugcauugacuacaugUUUGCCAUGAAAGAGCUUGGACGCCGAggcaaaauggcggacUACGUGGCUAUAAAAUAUGUUGUAGAugguauacaagaucaa
..................((((.((.((((((((((((((.........(..(((((........)))))..)..))))))....)))))))).)).))))..............

Structure

aaagucaaaugaaucaug    g  u        ----      AAAGAGCUU GA     Agg 
                  cauu ac acaugUUU    GCCAUG         G  CGCCG   c
                  |||| || ||||||||    ||||||         |  |||||    
                  guAG UG UGUAUAAA    CGGUGC         c  gcggu   a
----aacuagaacauaug    A  U        AUAU      -------AU ag     aaa 

Annotation confidence Low

Genome context

dbj|BSVE01000018.1|: 7460413-7460527 [-]

Mature bmo-miR-3238-5p

• Accession: MIMAT0015421
• Description: Bombyx mori bmo-miR-3238-5p mature miRNA
• Sequence: 32 - UUUGCCAUGAAAGAGCUUGGACGCCGA - 58
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-3238-3p

• Accession: MIMAT0053231
• Description: Bombyx mori bmo-miR-3238-3p mature miRNA
• Sequence: 74 - UACGUGGCUAUAAAAUAUGUUGUAGA - 99
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415