Stem-loop bmo-mir-3241

Accession

MI0014296

Description

Bombyx mori bmo-mir-3241 precursor miRNA

Sequence

10 reads, 2.0 reads per million, 3 experiments

cacuaccgcauagaauAUAAAGGAUCUUUACCAAAGCAgucuugccucauaauaaaauugccaauaauaucuugagcuccagacuacauugaaagauaauuuguucugcaaugaaagguac
...((((.(((.(...(((((..((((((..(((.(.(((((.((.(((..(((.............)))..)))))...))))).).)))))))))..)))))....).)))...)))).

Structure

cac    --g   a -aau     GG      AC   A C     --u  c   ua   aaauu 
   uacc   cau g    AUAAA  AUCUUU  CAA G Agucu   gc uca  aua     g
   ||||   ||| |    |||||  ||||||  ||| | |||||   || |||  |||     c
   augg   gua c    uguuu  uagaaa  guu c ucaga   cg agu  uau     c
--c    aaa   a gucu     aa      --   a a     ccu  -   uc   aauaa 

Annotation confidence Not enough data

Genome context

dbj|BSVE01000013.1|: 12946775-12946895 [-]

Mature bmo-miR-3241-5p

• Accession: MIMAT0015423
• Description: Bombyx mori bmo-miR-3241-5p mature miRNA
• Sequence: 17 - AUAAAGGAUCUUUACCAAAGCA - 38
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415