Stem-loop bmo-mir-3243

Accession

MI0014298

Description

Bombyx mori bmo-mir-3243 precursor miRNA

Sequence

32 reads, 8 reads per million, 3 experiments

guaucuaaauguuuucacgaacgacuuuuacggugaaggaauaacaucagauuauucuacgucuuauauguguaaugcuguauugacggaaauuuaguuUGGAACAUUCCAGUCGUUCGUAgcgccauuuuguuuuuagaugu
.((((((((((((...((((((((((...........(((((....((((((((.....((((.((((.((.....))))))..))))......))))))))...)))))))))))))))))))..........)))))))).

Structure

g        ----------    uuc          uuuacggugaa     aaca        -uucua    -u    u  g 
 uaucuaaa          uguu   acgaacgacu           ggaau    ucagauua      cguc  uaua gu u
 ||||||||          ||||   ||||||||||           |||||    ||||||||      ||||  |||| || a
 guagauuu          gcgA   UGCUUGCUGA           CCUUA    GGUuugau      gcag  augu cg a
u        uuguuuuacc    ---          -----------     -CAA        uuaaag    uu    -  u 

Annotation confidence Not enough data

Genome context

NW_004581687.1: 2846647-2846789 [-]

Mature bmo-miR-3243

• Accession: MIMAT0015425
• Description: Bombyx mori bmo-miR-3243 mature miRNA
• Sequence: 100 - UGGAACAUUCCAGUCGUUCGUA - 121
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415