Stem-loop bmo-mir-3244

Accession

MI0014299

Description

Bombyx mori bmo-mir-3244 precursor miRNA

Sequence

43069 reads, 892.0 reads per million, 34 experiments

cuuuuuaUCCCGAGUAGGACGAAUGGCAGUACUUCcauugaguuuucguuacugugacaaauugauagagauuuuUAGCUGACGAUGGAAUCUUUCUAuggcgccauuacauugcggguggu
....((((((((((((((.((.((((.((...((((((((((((...(((.((((.(.....).)))).)))....))))..))))))))...))))))..))))..))).))).)))))).

Structure

cuuu      -   -   --  A  -A    C  UAC        --    -uuc   a    g c 
    uuaUCC CGA GUA  GG CG  AUGG AG   UUCcauug  aguu    guu cugu a a
    |||||| ||| |||  || ||  |||| ||   ||||||||  ||||    ||| |||| | a
    gguggg guu cau  cc gc  uAUC UU   AAGGUAGC  UCGA    uag gaua u a
---u      c   a   ua  -  gg    -  UCU        AG    Uuuu   a    g u 

Annotation confidence Low

Genome context

dbj|BSVE01000014.1|: 492908-493029 [-]

Mature bmo-miR-3244-5p

• Accession: MIMAT0053233
• Description: Bombyx mori bmo-miR-3244-5p mature miRNA
• Sequence: 8 - UCCCGAGUAGGACGAAUGGCAGUACUUC - 35
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-3244-3p

• Accession: MIMAT0015426
• Description: Bombyx mori bmo-miR-3244-3p mature miRNA
• Sequence: 76 - UAGCUGACGAUGGAAUCUUUCUA - 98
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415