miRBase entry: bmo-mir-3244

Stem-loop bmo-mir-3244


Accession
MI0014299
Description
Bombyx mori bmo-mir-3244 precursor miRNA


Sequence

302 reads, 87 reads per million, 3 experiments
cuuuuuaucccgaguaggacgaauggcaguacuuccauugaguuuucguuacugugacaaauugauagagauuuuUAGCUGACGAUGGAAUCUUUCUAuggcgccauuacauugcggguggu
....((((((((((((((.((.((((.((...((((((((((((...(((.((((.(.....).)))).)))....))))..))))))))...))))))..))))..))).))).)))))).

Structure
cuuu      -   -   --  a  -a    c  uac        --    -uuc   a    g c 
    uuaucc cga gua  gg cg  augg ag   uuccauug  aguu    guu cugu a a
    |||||| ||| |||  || ||  |||| ||   ||||||||  ||||    ||| |||| | a
    gguggg guu cau  cc gc  uAUC UU   AAGGUAGC  UCGA    uag gaua u a
---u      c   a   ua  -  gg    -  UCU        AG    Uuuu   a    g u 


Annotation confidence Not enough data
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Genome context
NW_004581689.1: 26005-26126 [-]

Database links

Mature bmo-miR-3244

Accession MIMAT0015426
Description Bombyx mori bmo-miR-3244 mature miRNA
Sequence 76 - UAGCUGACGAUGGAAUCUUUCUA - 98
Evidence experimental
SOLID [1]
Database links

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415