miRBase entry: bmo-mir-3246

Dead hairpin entry

Stem-loop bmo-mir-3246


Accession
MI0014301
Description
Bombyx mori bmo-mir-3246 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

1551 reads, 26.0 reads per million, 31 experiments
cuuguuuuaacuugauauuUUGCUAUCAGAACAUUGUGUCAUucucgacaaguacucgucuuuuacuugcgcgucagcaagugcaucgaagucgaguaccgucgggcacauaauUGUUUCUAUGCGGGAUAAUGUGUCGGCUaca
...(((...((....((((((((.((..(((((((((((....((((((..(((((((.(((((((((((......)))))))....)))).))))))).)))))).)))))).)))))..))))))))))..))...)))....

Structure
-cuu   uua  uuga        U  CA     -      CAUu      aa       u    ----       gc 
    guu   ac    uauuUUGC AU  GAACA UUGUGU    cucgac  guacucg cuuu    uacuugc  g
    |||   ||    |||||||| ||  ||||| ||||||    ||||||  ||||||| ||||    |||||||   
    CGG   UG    AUAGGGCG UA  UUUGU aauaca    gggcug  caugagc gaag    gugaacg  u
acaU   CUG  --UA        -  UC     u      ---c      -c       u    cuac       ac