miRBase entry: bmo-mir-3246

Stem-loop bmo-mir-3246


Accession
MI0014301
Description
Bombyx mori bmo-mir-3246 precursor miRNA


Sequence

1551 reads, 26.0 reads per million, 31 experiments
cuuguuuuaacuugauauuUUGCUAUCAGAACAUUGUGUCAUucucgacaaguacucgucuuuuacuugcgcgucagcaagugcaucgaagucgaguaccgucgggcacauaauUGUUUCUAUGCGGGAUAAUGUGUCGGCUaca
...(((...((....((((((((.((..(((((((((((....((((((..(((((((.(((((((((((......)))))))....)))).))))))).)))))).)))))).)))))..))))))))))..))...)))....

Structure
-cuu   uua  uuga        U  CA     -      CAUu      aa       u    ----       gc 
    guu   ac    uauuUUGC AU  GAACA UUGUGU    cucgac  guacucg cuuu    uacuugc  g
    |||   ||    |||||||| ||  ||||| ||||||    ||||||  ||||||| ||||    |||||||   
    CGG   UG    AUAGGGCG UA  UUUGU aauaca    gggcug  caugagc gaag    gugaacg  u
acaU   CUG  --UA        -  UC     u      ---c      -c       u    cuac       ac 


Annotation confidence Low
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Genome context
dbj|BSVE01000014.1|: 2445750-2445894 [-]

Database links

Mature bmo-miR-3246-5p

Accession MIMAT0015428
Description Bombyx mori bmo-miR-3246-5p mature miRNA
Sequence 20 - UUGCUAUCAGAACAUUGUGUCAU - 42
Evidence experimental
SOLID [1]
Database links

Mature bmo-miR-3246-3p

Accession MIMAT0053235
Description Bombyx mori bmo-miR-3246-3p mature miRNA
Sequence 115 - UGUUUCUAUGCGGGAUAAUGUGUCGGCU - 142
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415