miRBase entry: bmo-mir-3247

Stem-loop bmo-mir-3247


Accession
MI0014302
Description
Bombyx mori bmo-mir-3247 precursor miRNA


Sequence

287 reads, 7.0 reads per million, 33 experiments
uauuaaAUUGUAAAAAAGCGUGGGuugccguucaggauauuaucaaaauaacccuucuacucauaucuguucauaaaauauuuaUAACUACUGAUACCAUGCACCCCAuguuuuuuuuuaguug
.....(((((.(((((((((((((.(((.((((((....((((..(((((........((........))........)))))))))...)))).))...))).))))))))))))).))))).

Structure
uauua     U             u   --c  -    gaua    ca     acccuucu  uca 
     aAUUG AAAAAAGCGUGGG ugc   gu ucag    uuau  aaaua        ac   u
     ||||| ||||||||||||| |||   || ||||    ||||  |||||        ||    
     uugau uuuuuuuguACCC ACG   CA AGUC    AAUa  uuuau        ug   a
----g     u             C   UAC  U    -AUC    --     aaaauacu  ucu 


Annotation confidence Not enough data
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Genome context
dbj|BSVE01000014.1|: 4271331-4271454 [+]

Database links

Mature bmo-miR-3247-5p

Accession MIMAT0053236
Description Bombyx mori bmo-miR-3247-5p mature miRNA
Sequence 7 - AUUGUAAAAAAGCGUGGG - 24
Evidence experimental
SOLID [1]

Mature bmo-miR-3247-3p

Accession MIMAT0015429
Description Bombyx mori bmo-miR-3247-3p mature miRNA
Sequence 85 - UAACUACUGAUACCAUGCACCCCA - 108
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415