Stem-loop bmo-mir-3248

Accession

MI0014303

Description

Bombyx mori bmo-mir-3248 precursor miRNA

Sequence

2436 reads, 31.0 reads per million, 32 experiments

gagcugguguuggcaaacacugcUGUAAAUCAAAUGUGUACACCUGuaacgugucaucauucuugcaccuuagcgugucagcucguuucauuucauaggcuugaucagcuagcg
..((((((..((((((.(.(((.((.((((.(((((.(((((((((....(((.((.......)))))..))).))))..)).))))).)))))))))).))).))))))))).

Structure

ga      gu   -   a a   c  U    C     U  --    -   uaac   u  uc 
  gcuggu  ugg caa c cug UG AAAU AAAUG GU  ACAC CUG    gug ca  a
  ||||||  ||| ||| | ||| || |||| ||||| ||  |||| |||    ||| ||  u
  cgaucg  acu guu g gau ac uuua uuugc cg  ugug gau    cac gu  u
-g      --   a   c -   -  -    c     u  ac    c   --uc   -  uc 

Annotation confidence Not enough data

Genome context

dbj|BSVE01000028.1|: 5409272-5409385 [+]

Mature bmo-miR-3248-5p

• Accession: MIMAT0015430
• Description: Bombyx mori bmo-miR-3248-5p mature miRNA
• Sequence: 24 - UGUAAAUCAAAUGUGUACACCUG - 46
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415