Stem-loop bmo-mir-2807d

Accession

MI0014306

Description

Bombyx mori bmo-mir-2807d precursor miRNA

Sequence

6861 reads, 140.0 reads per million, 34 experiments

agugcgaguuauuuaacauuuUCGAUAGCGUAAAAGUUAguucauauuuguauggaaugggaccguuugccgcuagaggcgcuguucCAGCUGCAUACAAAAUUGGGCuaauuuuuacgcuaucgagaacguuaaaaaacucgcacuaa
((((((((((.((((((.((((((((((((((((((((((((((..((((((((.(.((((((.((..(((......))))).))))))..).))))))))..)))))))))))))))))))))))))).)))))).))))))))))..

Structure

--          a      a                          ua        g -a      c  uu   gc 
  agugcgaguu uuuaac uuuUCGAUAGCGUAAAAGUUAguuca  uuuguaug a  ugggac gu  gcc  u
  |||||||||| |||||| ||||||||||||||||||||||||||  |||||||| |  |||||| ||  |||   
  ucacgcucaa aaauug aagagcuaucgcauuuuuaauCGGGU  AAACAUAC U  ACcuug cg  cgg  a
aa          a      c                          UA        G CG      u  --   ag 

Annotation confidence Medium

Genome context

dbj|BSVE01000002.1|: 7107901-7108049 [+]

Mature bmo-miR-2807d-5p

• Accession: MIMAT0053237
• Description: Bombyx mori bmo-miR-2807d-5p mature miRNA
• Sequence: 22 - UCGAUAGCGUAAAAGUUA - 39
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-2807d-3p

• Accession: MIMAT0015433
• Description: Bombyx mori bmo-miR-2807d-3p mature miRNA
• Sequence: 88 - CAGCUGCAUACAAAAUUGGGC - 108
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415