Stem-loop bmo-mir-3253

Accession

MI0014309

Description

Bombyx mori bmo-mir-3253 precursor miRNA

Sequence

687 reads, 89.0 reads per million, 6 experiments

gcuuuaauaguugugcucguugauaguaaguugauaaaggauuauuuuguucuaagaUACCUUUAACUCACUGUGUACGGuauaccuuaaaaagaagaaaaaaaa
.((((...((.(((((.(((..(((((.((((((...(((..(((((((...)))))))))))))))).)))))..)))))))).))...))))...........

Structure

----------g    aau  u     u   ug     a      uaa   au       u 
           cuuu   ag ugugc cgu  auagu aguuga   agg  uauuuug  
           ||||   || ||||| |||  ||||| ||||||   |||  ||||||| u
           gaaa   uc auauG GCA  UGUCA UCAAUU   UCC  AUagaau  
aaaaaaaagaa    aau  c     -   UG     C      ---   --       c 

Annotation confidence Not enough data

Genome context

dbj|BSVE01000012.1|: 12378828-12378932 [-]

Mature bmo-miR-3253-3p

• Accession: MIMAT0015436
• Description: Bombyx mori bmo-miR-3253-3p mature miRNA
• Sequence: 58 - UACCUUUAACUCACUGUGUACGG - 80
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415