Stem-loop bmo-mir-3254

Accession

MI0014310

Description

Bombyx mori bmo-mir-3254 precursor miRNA

Sequence

175093 reads, 5426.0 reads per million, 24 experiments

aggccggccuugUAAGCUUCGAACUUCGCGAUUAUGUCCggacagacgucGCGGACGAACUUAAAGAAGAGcgcgcca
.(((..(((((.((((.((((...((((((((...(((......)))))))))))))))))))...))).))..))).

Structure

a   cg  -   --g    C    AAC        UAU   Cg 
 ggc  gc cuu   UAAG UUCG   UUCGCGAU   GUC  g
 |||  || |||   |||| ||||   ||||||||   |||   
 ccg  cG GAA   AUUC AAGC   AGGCGcug   cag  a
a   cg  A   GAA    -    ---        ---   ac 

Annotation confidence Low

Genome context

dbj|BSVE01000025.1|: 112874-112951 [+]

Mature bmo-miR-3254-5p

• Accession: MIMAT0053238
• Description: Bombyx mori bmo-miR-3254-5p mature miRNA
• Sequence: 13 - UAAGCUUCGAACUUCGCGAUUAUGUCC - 39
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-3254-3p

• Accession: MIMAT0015437
• Description: Bombyx mori bmo-miR-3254-3p mature miRNA
• Sequence: 51 - GCGGACGAACUUAAAGAAGAG - 71
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415