miRBase entry: bmo-mir-3257

Stem-loop bmo-mir-3257


Accession
MI0014313
Description
Bombyx mori bmo-mir-3257 precursor miRNA


Sequence

95 reads, 19 reads per million, 3 experiments
guuggcUGGCGAUUACGCGAUUUGCCGUGACCAGAggacaaauguacgcuucauaUACGUUAUGAGUCGUCGCGUUAAucggaccgaa
.((((....(((((((((((((((((.........)).)))))..(((.((((((.....)))))).))))))).))))))..)))).

Structure
g    cUGG      -    ---------------------------     -  GUG 
 uugg    CGAUUA CGCG                           AUUUG CC   A
 ||||    |||||| ||||                           ||||| ||   C
 agcc    gcuAAU GCGC                           uaaac gg   C
a    --ag      U    UGCUGAGUAUUGCAUauacuucgcaug     a  AGA 


Annotation confidence Not enough data
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Genome context
NW_004581785.1: 181207-181294 [+]

Database links

Mature bmo-miR-3257-5p

Accession MIMAT0015440
Description Bombyx mori bmo-miR-3257-5p mature miRNA
Sequence 7 - UGGCGAUUACGCGAUUUGCCGUGACCAGA - 35
Evidence experimental
SOLID [1]

Mature bmo-miR-3257-3p

Accession MIMAT0015441
Description Bombyx mori bmo-miR-3257-3p mature miRNA
Sequence 56 - UACGUUAUGAGUCGUCGCGUUAA - 78
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415