Stem-loop bmo-mir-3257

Accession

MI0014313

Description

Bombyx mori bmo-mir-3257 precursor miRNA

Sequence

8076 reads, 161.0 reads per million, 34 experiments

guuggcuggcgauuacgcgauuUGCCGUGACCAGAGGACAAAUGUAcgcuucauauacguUAUGAGUCGUCGCGUUAAUCGGACCgaa
.((((....(((((((((((((((((.........)).)))))..(((.((((((.....)))))).))))))).))))))..)))).

Structure

g    cugg      -    ---------------------------     -  GUG 
 uugg    cgauua cgcg                           auuUG CC   A
 ||||    |||||| ||||                           ||||| ||   C
 agCC    GCUAAU GCGC                           UAAAC GG   C
a    --AG      U    UGCUGAGUAUugcauauacuucgcAUG     A  AGA 

Annotation confidence Medium

Genome context

dbj|BSVE01000007.1|: 10908377-10908464 [+]

Mature bmo-miR-3257-5p

• Accession: MIMAT0015440
• Description: Bombyx mori bmo-miR-3257-5p mature miRNA
• Sequence: 23 - UGCCGUGACCAGAGGACAAAUGUA - 46
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-3257-3p

• Accession: MIMAT0015441
• Description: Bombyx mori bmo-miR-3257-3p mature miRNA
• Sequence: 61 - UAUGAGUCGUCGCGUUAAUCGGACC - 85
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415