Stem-loop bmo-mir-3271

Accession

MI0014327

Description

Bombyx mori bmo-mir-3271 precursor miRNA

Sequence

9 reads, 5 reads per million, 2 experiments

gcgguggauucguggauuuucguguggcaaacagaacagugcgUGACAUCAUGUGCGCGUGCUGCUgaguaacaauagcagcagcaccccacguguuuucacgcucguagucugugaagcaacaaggcagcagugcagugcg
(((.((.(((..((.....((.(((.((..(((((...(.((((((...((((((.(.(((((((((...........))))))))).)))))))...)))))).)....)))))...)).))).))))..))).)).))).

Structure

-   g  g   cg  gauuu  g   g  -aa     -aca u      CAU      C C         agua 
 gcg ug auu  ug     uc ugu gc   acaga    g gcgUGA   CAUGUG G GUGCUGCUg    a
 ||| || |||  ||     || ||| ||   |||||    | ||||||   |||||| | |||||||||    c
 cgu ac uga  ac     gg aca cg   ugucu    c cgcacu   gugcac c cacgacgac    a
g   g  g   cg  -----  a   a  aag     gaug u      uuu      - c         gaua 

Annotation confidence Not enough data

Genome context

NW_004582033.1: 358062-358203 [+]

Mature bmo-miR-3271

• Accession: MIMAT0015456
• Description: Bombyx mori bmo-miR-3271 mature miRNA
• Sequence: 44 - UGACAUCAUGUGCGCGUGCUGCU - 66
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415