Stem-loop bmo-mir-3273

Accession

MI0014329

Description

Bombyx mori bmo-mir-3273 precursor miRNA

Sequence

5649 reads, 117.0 reads per million, 34 experiments

uuaauugaggguauuuuuuuauugcUUAGAUGGGUGGACGAGCUCgcagcccaucugauguuaagugguuaccggagcccguagacaucuacaacguaaaugccuccacccaucuuagauaugAGUUCUAAGGUCUCAGUA
...(((((((.(.....(((((..((.(((((((((((.(.((.....((......((((((.(..((((.....))))..).))))))......))....)))))))))))))).))..)))))......).))))))).

Structure

uua       g -auuuu     ug  U           C A  UCgca  ccaucu      a gu    a 
   auugagg u      uuuau  cU AGAUGGGUGGA G GC     gc      gauguu a  gguu c
   ||||||| |      |||||  || ||||||||||| | ||     ||      |||||| |  |||| c
   UGACUCU G      GAgua  ga ucuacccaccu c cg     ug      cuacag u  ccga g
--A       G AAUCUU     ua  u           - -  -uaaa  caacau      a gc    g 

Annotation confidence Low

Genome context

dbj|BSVE01000001.1|: 18280330-18280470 [+]

Mature bmo-miR-3273-5p

• Accession: MIMAT0053239
• Description: Bombyx mori bmo-miR-3273-5p mature miRNA
• Sequence: 26 - UUAGAUGGGUGGACGAGCUC - 45
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-3273-3p

• Accession: MIMAT0015458
• Description: Bombyx mori bmo-miR-3273-3p mature miRNA
• Sequence: 124 - AGUUCUAAGGUCUCAGUA - 141
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415