miRBase entry: bmo-mir-3274

Stem-loop bmo-mir-3274


Accession
MI0014330
Description
Bombyx mori bmo-mir-3274 precursor miRNA


Sequence

2913 reads, 59.0 reads per million, 33 experiments
cacugcauaugaugcgugaauguauaUUUCAUCUAAGAAAACUAUUGGCCaaccuucuacacgauuuugcuucaUAGUAUCGAUAUACUUGCGUCUCCAUGcaa
...(((((..((.((((((..(((((((....(((.(((....((((..............)))).....))).)))....))))))))))))).)).))))).

Structure
cac     au  u      au       UCAU   A   -AACU    GCCaac 
   ugcau  ga gcguga  guauaUU    CUA GAA     AUUG      c
   |||||  || ||||||  |||||||    ||| |||     ||||       
   acGUA  CU UGCGUU  CAUAUAG    GAU cuu     uagc      u
--a     -C  C      --       CUAU   a   cguuu    acaucu 


Annotation confidence Low
Do you think this miRNA is real?

Genome context
dbj|BSVE01000021.1|: 1585473-1585576 [+]

Database links

Mature bmo-miR-3274-5p

Accession MIMAT0053240
Description Bombyx mori bmo-miR-3274-5p mature miRNA
Sequence 27 - UUUCAUCUAAGAAAACUAUUGGCC - 50
Evidence experimental
SOLID [1]

Mature bmo-miR-3274-3p

Accession MIMAT0015459
Description Bombyx mori bmo-miR-3274-3p mature miRNA
Sequence 75 - UAGUAUCGAUAUACUUGCGUCUCCAUG - 101
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415