miRBase entry: bmo-mir-3275

Dead hairpin entry

Stem-loop bmo-mir-3275


Accession
MI0014331
Description
Bombyx mori bmo-mir-3275 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

28745 reads, 667.0 reads per million, 33 experiments
cgaauuagugauuauacaauuaagucggugaauuaucaaguuccuuaucuuaggacuuacAGUACGAGGAGCAUCUCGAAGUUGGAGCacgaagaacugggagacgggaugaugaugauuUGAUUCUUGAGUAGGACUUCCUUCa
.(((..(((..((((.(((((((((((....((((((..((((((..((((.(..(((......((((......))))......)))..).))))...)))).))..))))))..)))))))))...)).)))).)))...))).

Structure
c   -uu   ga    a  ---         guga      aa  -    -ua    a ga   acAGUA    GA 
 gaa   agu  uuau ca   auuaagucg    auuauc  gu uccu   ucuu g  cuu      CGAG  G
 |||   |||  |||| ||   |||||||||    ||||||  || ||||   |||| |  |||      ||||   
 CUU   UCA  GAUG GU   UAGUuuagu    uaguag  ca aggg   agaa c  GAG      GCUC  C
a   CCU   -G    A  UCU         --ag      gg  g    uca    g aC   GUUGAA    UA