Stem-loop bmo-mir-3288

Accession

MI0014345

Description

Bombyx mori bmo-mir-3288 precursor miRNA

Sequence

51 reads, 2.0 reads per million, 18 experiments

uagcuugcuuugagcuuggagUAGCUUGCUUGGAGUAGCUUGCUUggagcuuggaguagcuugcuuggagguuggaguagcuuguuuggagcuuggaguagcucuugugaguucgcgcgggua
..((((((..((((((((((((.((((((((.(((.((((.((((.((.(((.(((((...))))).))).)).))))))))..))).))))...)))).)))))...))))))).)))))).

Structure

ua      uu       ---     A    ---    G   -U    U    g  g   g     g 
  gcuugc  ugagcuu   ggagU GCUU   GCUU GAG  AGCU GCUU ga cuu gagua  
  ||||||  |||||||   ||||| ||||   |||| |||  |||| |||| || ||| ||||| c
  ugggcg  gcuugag   ucucg ugag   cgag uuu  ucga ugag uu gag uucgu  
-a      -c       ugu     a    guu    g   gu    -    g  g   g     u 

Annotation confidence Not enough data

Genome context

dbj|BSVE01000029.1|: 7519127-7519249 [-]

Mature bmo-miR-3288-5p

• Accession: MIMAT0015475
• Description: Bombyx mori bmo-miR-3288-5p mature miRNA
• Sequence: 22 - UAGCUUGCUUGGAGUAGCUUGCUU - 45
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415