miRBase entry: bmo-mir-3293

Stem-loop bmo-mir-3293


Accession
MI0014350
Description
Bombyx mori bmo-mir-3293 precursor miRNA


Sequence

3 reads, 2.0 reads per million, 1 experiments
auuauuuugacgcauagcggaUGGUACGUGAAAAAUAGAUUUCUAgaaacuucacuauucaauucaagugaacauucaucuugaauaagucuagaauccgaaaauuaaguuauuuuuacgcacaaucuuuaggcuguuucuuuaaaauc
...(((((((...(((((((((.((.((((((((...(..(((((((..(((.........((((((((((....))).)))))))))))))))))..).............)))))))).)).))))....)))))....))))))).

Structure
auu       -cgc     ----    G  A        ----------AUA AU       aa   cacuauuca       -   a 
   auuuuga    auagc    ggaU GU CGUGAAAA             G  UUCUAga  cuu         auucaag uga c
   |||||||    |||||    |||| || ||||||||             |  |||||||  |||         ||||||| |||  
   uaaaauu    ugucg    ucua ca gcauuuuu             c  aagaucu  gaa         uaaguuc acu a
--c       ucuu     gauu    a  c        auugaauuaaaag cu       --   ---------       u   u 


Annotation confidence Not enough data
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Genome context
dbj|BSVE01000029.1|: 3573042-3573190 [-]

Database links

Mature bmo-miR-3293-5p

Accession MIMAT0015480
Description Bombyx mori bmo-miR-3293-5p mature miRNA
Sequence 22 - UGGUACGUGAAAAAUAGAUUUCUA - 45
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415