Stem-loop bmo-mir-3294

Accession

MI0014351

Description

Bombyx mori bmo-mir-3294 precursor miRNA

Sequence

1472 reads, 27.0 reads per million, 34 experiments

aaucuuuugacauauaucgcguguucacGGUAGGUAUUGGCUCGUGGCACUauguaguACCACAGACAGUAUCUAACCUGAacacagauauuucaucgugaa
..((...(((...(((((..(((((((.(((((((((((.((.((((.(((....))).)))))).)))))))).)))))))))).))))).)))....)).

Structure

aa  -uuu   cau     gc       c   -        G  C    C   a 
  uc    uga   auauc  guguuca GGU AGGUAUUG CU GUGG ACU u
  ||    |||   |||||  ||||||| ||| |||||||| || |||| |||  
  ag    acu   uauag  cacaAGU CCA UCUAUGAC GA CACC uga g
-a  ugcu   --u     -a       -   A        A  -    A   u 

Annotation confidence Medium

Genome context

dbj|BSVE01000029.1|: 4924976-4925077 [-]

Mature bmo-miR-3294-5p

• Accession: MIMAT0053242
• Description: Bombyx mori bmo-miR-3294-5p mature miRNA
• Sequence: 29 - GGUAGGUAUUGGCUCGUGGCACU - 51
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-3294-3p

• Accession: MIMAT0015481
• Description: Bombyx mori bmo-miR-3294-3p mature miRNA
• Sequence: 59 - ACCACAGACAGUAUCUAACCUGA - 81
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415