Stem-loop bmo-mir-3301

Accession

MI0014358

Description

Bombyx mori bmo-mir-3301 precursor miRNA

Sequence

26 reads, 3 reads per million, 3 experiments

uaaguauguguuucauuauaaauUUCGGUGAUAGUAACCCGUUGAGUuucucgccggauauucucagugggucgcgauuccaauccgauaguaaauucugcg
...(((.(.((((.(((((....((.((.(((.((.((((((((((..(.((....)).)..)))))))))).)).)))))))....))))))))).)))).

Structure

uaa   u u    c     aaau  C  U   A  A          Uu c  g 
   gua g guuu auuau    UU GG GAU GU ACCCGUUGAG  u uc c
   ||| | |||| |||||    || || ||| || ||||||||||  | ||  
   cgu c uaaa ugaua    aa cc uua cg ugggugacuc  a ag c
--g   - u    -     gccu  -  -   g  c          uu u  g 

Annotation confidence Not enough data

Genome context

NW_004582617.1: 1268-1369 [+]

Mature bmo-miR-3301

• Accession: MIMAT0015489
• Description: Bombyx mori bmo-miR-3301 mature miRNA
• Sequence: 24 - UUCGGUGAUAGUAACCCGUUGAGU - 47
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415