miRBase entry: bmo-mir-3301

Dead hairpin entry

Stem-loop bmo-mir-3301


Accession
MI0014358
Description
Bombyx mori bmo-mir-3301 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

1416 reads, 28.0 reads per million, 34 experiments
uaaguauguguuucauuauaaauuucggugauaguaacccguUGAGUUUCUCGCCGGAUauuCUCAGUGGGUCGCGAUUCcaauccgauaguaaauucugcg
...(((.(.((((.(((((....((.((.(((.((.((((((((((..(.((....)).)..)))))))))).)).)))))))....))))))))).)))).

Structure
uaa   u u    c     aaau  c  u   a  a          UU C  G 
   gua g guuu auuau    uu gg gau gu acccguUGAG  U UC C
   ||| | |||| |||||    || || ||| || ||||||||||  | ||  
   cgu c uaaa ugaua    aa cC UUA CG UGGGUGACUC  a AG C
--g   - u    -     gccu  -  -   G  C          uu U  G