Stem-loop bmo-mir-3303

Accession

MI0014360

Description

Bombyx mori bmo-mir-3303 precursor miRNA

Sequence

721 reads, 26.0 reads per million, 16 experiments

gguuugaggagUUGGAUUACGCCCUCUGACACCUCccgauggaaugcaaccaucgagggugCAGAGACAUUCGGAGUGAACUG
.............((.((((.(((((((.((((.(.((((((.......)))))).))))))))))......)).)))).)).

Structure

gguuugaggagUU  A    G  ------     A    U c      aa 
             GG UUAC CC      CUCUG CACC C cgaugg  u
             || |||| ||      ||||| |||| | ||||||  g
             UC AGUG GG      GAGAC gugg g gcuacc  c
------------G  A    A  CUUACA     -    - a      aa 

Annotation confidence Medium

Genome context

dbj|BSVE01000030.1|: 2224356-2224438 [+]

Mature bmo-miR-3303-5p

• Accession: MIMAT0015491
• Description: Bombyx mori bmo-miR-3303-5p mature miRNA
• Sequence: 12 - UUGGAUUACGCCCUCUGACACCUC - 35
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-3303-3p

• Accession: MIMAT0053245
• Description: Bombyx mori bmo-miR-3303-3p mature miRNA
• Sequence: 62 - CAGAGACAUUCGGAGUGAACUG - 83
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415