Stem-loop bmo-mir-3304a

Accession

MI0014361

Description

Bombyx mori bmo-mir-3304a precursor miRNA

Sequence

1542 reads, 29.0 reads per million, 34 experiments

cagucucccuauuaaugauauuccaagucauuuuaauuuugucaggugcauuuUUUAUAAGAUUGCCUAAGUGcaaugacuuggccaauguacagacuuuuuUAAACAGCUUGGAAUAUUUACAGaca
..((((..........((((((((((((...(((((....(((..(((((((............(((.((((......))))))).))))))).)))....)))))..))))))))))))...)))).

Structure

ca    cccuauuaau            cau     uuuu   ag       uUUUAUAAGAUU   U    Gc 
  gucu          gauauuccaagu   uuuaa    guc  gugcauu            GCC AAGU  a
  ||||          ||||||||||||   |||||    |||  |||||||            ||| ||||   
  caGA          UUAUAAGGUUCG   AAAUu    cag  cauguaa            cgg uuca  a
-a    -------CAU            -AC     uuuu   -a       -----------c   -    gu 

Annotation confidence Low

Genome context

dbj|BSVE01000030.1|: 10576098-10576225 [+]

Mature bmo-miR-3304a-5p

• Accession: MIMAT0053246
• Description: Bombyx mori bmo-miR-3304a-5p mature miRNA
• Sequence: 54 - UUUAUAAGAUUGCCUAAGUG - 73
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-3304a-3p

• Accession: MIMAT0015492
• Description: Bombyx mori bmo-miR-3304a-3p mature miRNA
• Sequence: 103 - UAAACAGCUUGGAAUAUUUACAG - 125
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415