miRBase entry: bmo-mir-3305

Stem-loop bmo-mir-3305


Accession
MI0014362
Description
Bombyx mori bmo-mir-3305 precursor miRNA


Sequence

47 reads, 14 reads per million, 3 experiments
ugagcucuugucuaauauuuuuugauaaaauuuucgugguauuagaugaaagaauauauguuuuuauuauuacuuccauccguUUACAUAUGGUUAUUACGUCACUAGauggaaauauaaggccg
...((.(((((....(((((..((((..(((..((((((((...((((.(((((((...........)))).))).))))....))).)))))..)))..))))..))))).....)))))))..

Structure
uga  u     -cuaa     uu    aa   uu     -   -uua    a   -    uaug 
   gc cuugu     uauuu  ugau  aau  ucgug gua    gaug aag aaua    u
   || |||||     |||||  ||||  |||  ||||| |||    |||| ||| ||||    u
   cg gaaua     guaGA  ACUG  UUA  GGUAU CAU    cuac uuc uuau    u
-gc  -     uaaag     UC    CA   UU     A   Uugc    c   a    uauu 


Annotation confidence Not enough data
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Genome context
NW_004582029.1: 682698-682822 [-]

Database links

Mature bmo-miR-3305

Accession MIMAT0015493
Description Bombyx mori bmo-miR-3305 mature miRNA
Sequence 84 - UUACAUAUGGUUAUUACGUCACUAG - 108
Evidence experimental
SOLID [1]
Database links

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415