Stem-loop bmo-mir-3307

Accession

MI0014364

Description

Bombyx mori bmo-mir-3307 precursor miRNA

Sequence

15305 reads, 377.0 reads per million, 31 experiments

caugauggcgaucuguuuaauuggUAAACUGCACAUUGUAUCGCUUCGCACCgcagauguuuuggcaauuugguuuccgcuaauagcguccucguuuugucgcauaaugugcgguucauCCGUUCUGAUAUGCCAUUAA
..(((((((((((.....(((.(((.(((((((((((((...((...(((.((..(((((((((((............))))).))))))..))...))).))))))))))))))).))).)))..))).)))))))).

Structure

ca        -   uguuu   u   A             AUC  UUC   --C  ca      -     aauuu 
  ugauggcg auc     aau ggU AACUGCACAUUGU   GC   GCA   Cg  gauguu uuggc     g
  |||||||| |||     ||| ||| |||||||||||||   ||   |||   ||  |||||| |||||      
  AUUACCGU UAG     UUG Cua uuggcguguaaua   cg   ugu   gc  cugcga aaucg     g
-A        A   ---UC   C   c             ---  --c   uuu  uc      u     ccuuu 

Annotation confidence Low

Genome context

dbj|BSVE01000013.1|: 8397839-8397977 [-]

Mature bmo-miR-3307-5p

• Accession: MIMAT0015495
• Description: Bombyx mori bmo-miR-3307-5p mature miRNA
• Sequence: 25 - UAAACUGCACAUUGUAUCGCUUCGCACC - 52
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-3307-3p

• Accession: MIMAT0053248
• Description: Bombyx mori bmo-miR-3307-3p mature miRNA
• Sequence: 120 - CCGUUCUGAUAUGCCAUUAA - 139
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415