miRBase entry: bmo-mir-3307

Stem-loop bmo-mir-3307


Accession
MI0014364
Description
Bombyx mori bmo-mir-3307 precursor miRNA


Sequence

4 reads, 1 reads per million, 2 experiments
caugauggcgaucuguuuaauuGGUAAACUGCACAUUGUAUCGCUucgcaccgcagauguuuuggcaauuugguuuccgcuaauagcguccucguuuugucgcauaaugugcgguucauccguucugauaugccauuaa
..(((((((((((.....(((.(((.(((((((((((((...((...(((.((..(((((((((((............))))).))))))..))...))).))))))))))))))).))).)))..))).)))))))).

Structure
ca        -   uguuu   u   A             AUC  Uuc   --c  ca      -     aauuu 
  ugauggcg auc     aau GGU AACUGCACAUUGU   GC   gca   cg  gauguu uuggc     g
  |||||||| |||     ||| ||| |||||||||||||   ||   |||   ||  |||||| |||||      
  auuaccgu uag     uug cua uuggcguguaaua   cg   ugu   gc  cugcga aaucg     g
-a        a   ---uc   c   c             ---  --c   uuu  uc      u     ccuuu 


Annotation confidence Not enough data
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Genome context
NW_004582844.1: 2333-2471 [+]

Database links

Mature bmo-miR-3307

Accession MIMAT0015495
Description Bombyx mori bmo-miR-3307 mature miRNA
Sequence 23 - GGUAAACUGCACAUUGUAUCGCU - 45
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415