miRBase entry: bmo-mir-3307

Dead hairpin entry

Stem-loop bmo-mir-3307


Accession
MI0014364
Description
Bombyx mori bmo-mir-3307 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

15305 reads, 377.0 reads per million, 31 experiments
caugauggcgaucuguuuaauuggUAAACUGCACAUUGUAUCGCUUCGCACCgcagauguuuuggcaauuugguuuccgcuaauagcguccucguuuugucgcauaaugugcgguucauCCGUUCUGAUAUGCCAUUAA
..(((((((((((.....(((.(((.(((((((((((((...((...(((.((..(((((((((((............))))).))))))..))...))).))))))))))))))).))).)))..))).)))))))).

Structure
ca        -   uguuu   u   A             AUC  UUC   --C  ca      -     aauuu 
  ugauggcg auc     aau ggU AACUGCACAUUGU   GC   GCA   Cg  gauguu uuggc     g
  |||||||| |||     ||| ||| |||||||||||||   ||   |||   ||  |||||| |||||      
  AUUACCGU UAG     UUG Cua uuggcguguaaua   cg   ugu   gc  cugcga aaucg     g
-A        A   ---UC   C   c             ---  --c   uuu  uc      u     ccuuu