miRBase entry: bmo-mir-3309

Dead hairpin entry

Stem-loop bmo-mir-3309


Accession
MI0014366
Description
Bombyx mori bmo-mir-3309 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

4235 reads, 105.0 reads per million, 29 experiments
acaauuuggagaacacuuuauaaauauucgacauaaggcuuAUAGGCCUGUAGUUUUCUAUAauguuccuauccccuuuuuugUGUAAUAGUAUAAUUGUGCUCUUGguc
......(.((((.(((.(((((..((((..(((.((((...(((((..(((((....))))).....)))))..))))...)))..)))).)))))..))).)))).)..

Structure
acaauu g    a   -u     aa    cg   --u    cuu     ---CC     U 
      u gaga cac  uuaua  uauu  aca   aagg   AUAGG     UGUAG U
      | |||| |||  |||||  ||||  |||   ||||   |||||     |||||  
      g UUCU GUG  AAUAU  AUAA  Ugu   uucc   uaucc     AUAUC U
----cu G    C   UU     -G    UG   uuu    -cc     uugua     U