miRBase entry: bmo-mir-3310

Dead hairpin entry

Stem-loop bmo-mir-3310


Accession
MI0014367
Description
Bombyx mori bmo-mir-3310 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

1173 reads, 16.0 reads per million, 26 experiments
agcgguagacccgcaucccGCAGCUUGUAAACCAGCCCCUCGugccacacacggucgaaggcuuucucgaugucgagaaagaccgcgaccguguauuggcccgaguuguaccgguccgccAAGUGAUGCAGGACGCGAGUcaguugca
.((((..(((.(((.(((.((((((((...(((.((..((((.((((.(((((((((..((((((((((....)))))))).)).)))))))))..)))).))))..))...)))....)))))..))).))).))).)))..)))).

Structure
a    ua   c   a   c   --     -UAA   --A  CC    u    -c         aa  -        a 
 gcgg  gac cgc ucc GCA  GCUUG    ACC   GC  CUCG gcca  acacggucg  gg cuuucucg u
 ||||  ||| ||| ||| |||  |||||    |||   ||  |||| ||||  |||||||||  || ||||||||  
 cguu  cUG GCG AGG CGU  UGAAc    ugg   ug  gagc cggu  ugugccagc  cc gaaagagc g
a    ga   A   C   A   AG     cgcc   cca  uu    c    ua         -g  a        u