Stem-loop bmo-mir-3314

Accession

MI0014372

Description

Bombyx mori bmo-mir-3314 precursor miRNA

Literature search

1 open access papers mention bmo-mir-3314
(1 sentences)

Sequence

646 reads, 15.0 reads per million, 24 experiments

gggcauggcggcaUCGCAAAUGUUUGCCAUGGUGCCCCGGAaccagccgaccuccgcauccacguccgcgagccgcgcggguuuuggcgcccACGCAGCAACAGCGGCCGCCUCCa
(((...((((((..(((...((((.((..(((.((.((((((((.((((..(((.((..........))))).)).)).)))))))).))))).))))))...)))))))))))).

Structure

-   cau      aU   AAA    U  CA   U  C        a  -  ac   c  aucc 
 ggg   ggcggc  CGC   UGUU GC  UGG GC CCGGAacc gc cg  cuc gc    a
 |||   ||||||  |||   |||| ||  ||| || |||||||| || ||  ||| ||     
 CCU   CCGCCG  GCG   ACGA CG  Acc cg gguuuugg cg gc  gag cg    c
a   ---      --   ACA    -  -C   -  c        g  c  -c   -  ccug 

Annotation confidence Low

Genome context

dbj|BSVE01000014.1|: 12886231-12886346 [-]

Mature bmo-miR-3314-5p

• Accession: MIMAT0053252
• Description: Bombyx mori bmo-miR-3314-5p mature miRNA
• Sequence: 14 - UCGCAAAUGUUUGCCAUGGUGCCCCGGA - 41
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-3314-3p

• Accession: MIMAT0015502
• Description: Bombyx mori bmo-miR-3314-3p mature miRNA
• Sequence: 93 - ACGCAGCAACAGCGGCCGCCUCC - 115
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415