Stem-loop bmo-mir-3318

Accession

MI0014376

Description

Bombyx mori bmo-mir-3318 precursor miRNA

Literature search

1 open access papers mention bmo-mir-3318
(1 sentences)

Sequence

644 reads, 13.0 reads per million, 33 experiments

augaccuaucGGAUUUUACAUUUUUGCAUGUUGCgcuuaaaaaauuagacacagacacugcccgugcguuugaauccuaucagcgcuuaaauaauaagggaugcgaaaUACCAUUGUUUGUAGAUCUAGUgucu
..((.(((.(((((.......((((((((.(((((((.......((((((.((...........)).))))))........)))))...........)).)))))))).......)))))))).))........

Structure

------au  c   u     UUUACAU        G  -----------     -uaaaaaa      a  gaca 
        ga cua cGGAU       UUUUGCAU UU           GCgcu        uuagac ca    c
        || ||| |||||       |||||||| ||           |||||        |||||| ||    u
        CU GAU GUUUG       aaagcgua gg           cgcga        aguuug gu    g
ucugUGAU  A   -     UUACCAU        g  aauaauaaauu     cuauccua      c  gccc 

Annotation confidence Low

Genome context

dbj|BSVE01000020.1|: 11939768-11939901 [-]

Mature bmo-miR-3318-5p

• Accession: MIMAT0015506
• Description: Bombyx mori bmo-miR-3318-5p mature miRNA
• Sequence: 11 - GGAUUUUACAUUUUUGCAUGUUGC - 34
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-3318-3p

• Accession: MIMAT0053255
• Description: Bombyx mori bmo-miR-3318-3p mature miRNA
• Sequence: 109 - UACCAUUGUUUGUAGAUCUAGU - 130
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415