Dead hairpin entry

Stem-loop bmo-mir-3318

Accession

MI0014376

Description

Bombyx mori bmo-mir-3318 precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

1 open access papers mention bmo-mir-3318
(1 sentences)

Sequence

644 reads, 13.0 reads per million, 33 experiments

augaccuaucGGAUUUUACAUUUUUGCAUGUUGCgcuuaaaaaauuagacacagacacugcccgugcguuugaauccuaucagcgcuuaaauaauaagggaugcgaaaUACCAUUGUUUGUAGAUCUAGUgucu
..((.(((.(((((.......((((((((.(((((((.......((((((.((...........)).))))))........)))))...........)).)))))))).......)))))))).))........

Structure

------au  c   u     UUUACAU        G  -----------     -uaaaaaa      a  gaca 
        ga cua cGGAU       UUUUGCAU UU           GCgcu        uuagac ca    c
        || ||| |||||       |||||||| ||           |||||        |||||| ||    u
        CU GAU GUUUG       aaagcgua gg           cgcga        aguuug gu    g
ucugUGAU  A   -     UUACCAU        g  aauaauaaauu     cuauccua      c  gccc