Stem-loop bmo-mir-3319

Accession

MI0014377

Description

Bombyx mori bmo-mir-3319 precursor miRNA

Sequence

23 reads, 1.0 reads per million, 13 experiments

uggccuccgaguccggcacaccgccagcggggcccgguugcuggaguguccuggugccaacaccagugcggccgcggACAAGCUAGCAACCCGGCUCCGUGaauccugccggacccagaagugggcgua
..(((((.(.((((((((........((((((((.(((((((((..(((((..(.(((.((....))..))))..)))))..))))))))).))))))))......)))))))).).))....)))...

Structure

-ug   ----  c a        caccgcca        c         ag     ug u   -a  a 
   gcc    uc g guccggca        gcggggcc gguugcugg  ugucc  g gcc  ac c
   |||    || | ||||||||        |||||||| |||||||||  |||||  | |||  ||  
   cgg    ag c caggccgu        UGCCUCGG CCAACGAUC  ACAgg  c cgg  ug c
aug   guga  a c        --ccuaaG        C         GA     cg -   cg  a 

Annotation confidence Not enough data

Genome context

dbj|BSVE01000021.1|: 15218077-15218207 [-]

Mature bmo-miR-3319-3p

• Accession: MIMAT0015507
• Description: Bombyx mori bmo-miR-3319-3p mature miRNA
• Sequence: 78 - ACAAGCUAGCAACCCGGCUCCGUG - 101
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415