Stem-loop bmo-mir-3322

Accession

MI0014380

Description

Bombyx mori bmo-mir-3322 precursor miRNA

Sequence

19622 reads, 606.0 reads per million, 23 experiments

caggccucguuugUGUUCCAAUUGGAGUGUGGUUGGUGugucuguaaugccgguggguuucgugacuucaaUCUCGUCGGUUUGAAGUUGGCUAGgucc
..(((((.(((....(((.((((((.(...((((((...(((......(((....))).....))).)))))).).)))))).)))...))).))))).

Structure

ca     c   ugUG   C      A UGU      UGu   uguaau   g 
  ggccu guu    UUC AAUUGG G   GGUUGG   guc      gcc g
  ||||| |||    ||| |||||| |   ||||||   |||      |||  
  cugGA CGG    AAG UUGGCU C   CUaacu   cag      ugg u
-c     U   -UUG   U      G --U      --u   -ugcuu   g 

Annotation confidence Medium

Genome context

dbj|BSVE01000020.1|: 8228402-8228500 [-]

Mature bmo-miR-3322-5p

• Accession: MIMAT0053257
• Description: Bombyx mori bmo-miR-3322-5p mature miRNA
• Sequence: 14 - UGUUCCAAUUGGAGUGUGGUUGGUG - 38
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-3322-3p

• Accession: MIMAT0015509
• Description: Bombyx mori bmo-miR-3322-3p mature miRNA
• Sequence: 72 - UCUCGUCGGUUUGAAGUUGGCUAG - 95
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415