Stem-loop bmo-mir-3323

Accession

MI0014381

Description

Bombyx mori bmo-mir-3323 precursor miRNA

Sequence

5966 reads, 111.0 reads per million, 34 experiments

ugagaucccuuugaaggggcgUACUUUGUUAGCGUCGACAAUUuuuuguauauuagauacaucauuauCAAUACGAAUAAUGUUAAUGCCUuuacaggugacuuuuaaacaaucaac
.(((.(((((.(((((((((((.........)))))((((.((.(((((((....((((......)))).))))))).))))))....)))))).))).))))).............

Structure

------------u   a  -   u      ggcgUACUUUGUUAGCGUC    A  u       auua    ca 
             gag uc ccu ugaagg                   GACA UU uuuguau    gaua  u
             ||| || ||| ||||||                   |||| || |||||||    ||||   
             uuc ag gga auuUCC                   UUGU AA AAGCAUA    Cuau  c
caacuaacaaauu   -  u   c      ---------------GUAA    -  U       ---A    ua 

Annotation confidence Medium

Genome context

dbj|BSVE01000024.1|: 13428864-13428980 [+]

Mature bmo-miR-3323-5p

• Accession: MIMAT0053258
• Description: Bombyx mori bmo-miR-3323-5p mature miRNA
• Sequence: 22 - UACUUUGUUAGCGUCGACAAUU - 43
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-3323-3p

• Accession: MIMAT0015510
• Description: Bombyx mori bmo-miR-3323-3p mature miRNA
• Sequence: 69 - CAAUACGAAUAAUGUUAAUGCCU - 91
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415