miRBase entry: bmo-mir-3324

Stem-loop bmo-mir-3324


Accession
MI0014382
Description
Bombyx mori bmo-mir-3324 precursor miRNA


Sequence

31340 reads, 690.0 reads per million, 34 experiments
acuccgcaaauacagcgUCCAUGAUCCCUGAGUGCCUAGGUggggcggcuuaaaaacucucgccuugcggcgaggccccaACUUCUCGGACCUGAGCGGUucuauugaacgcagguggcgaugcggc
...(((((..(((.((((.((.((.((((.((..((.(((((((((............((((((....))))))))))))...))).))..)).)).)).))...)).))))..)))....))))).

Structure
acu     --aa   -a    C  --U  U  -  G  UG  U   ---      ggcuuaaaaacu      u 
   ccgca    uac  gcgU CA   GA CC CU AG  CC AGG   Uggggc            cucgcc u
   |||||    |||  |||| ||   || || || ||  || |||   ||||||            ||||||  
   ggcgu    gug  cgca gu   cu GG GA UC  GG UCU   accccg            gagcgg g
--c     agcg   ga    a  uau  U  C  G  CA  C   UCA      ------------      c 


Annotation confidence Medium
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Genome context
dbj|BSVE01000024.1|: 13411624-13411750 [+]

Database links

Mature bmo-miR-3324-5p

Accession MIMAT0015511
Description Bombyx mori bmo-miR-3324-5p mature miRNA
Sequence 18 - UCCAUGAUCCCUGAGUGCCUAGGU - 41
Evidence experimental
SOLID [1]

Mature bmo-miR-3324-3p

Accession MIMAT0053259
Description Bombyx mori bmo-miR-3324-3p mature miRNA
Sequence 81 - ACUUCUCGGACCUGAGCGGU - 100
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415