Stem-loop bmo-mir-3325

Accession

MI0014383

Description

Bombyx mori bmo-mir-3325 precursor miRNA

Sequence

1205 reads, 21.0 reads per million, 34 experiments

ggcaaguguguauuggccagaucaccccucauUAUAUCUGAAGCAAGUAcaaguaaacaaucaguaccagcaaaaagaaaacuguugUUACUUGAGGAUAAAUUugacagugaugagucaaauacaccagca
.((..((((((.(((((...(((((...(((...(((((..........(((((((.(((.((((...............)))))))))))))).)))))....)))..)))))..)))))))))))..)).

Structure

g  aa      a     cag     ccc   -uUA     GAAGCAAGUA       a   u    accagc 
 gc  gugugu uuggc   aucac   uca    UAUCU          caaguaa caa cagu      a
 ||  |||||| |||||   |||||   |||    |||||          ||||||| ||| ||||      a
 cg  cacaua aacug   uagug   agu    AUAGG          GUUCAUU guu guca      a
a  ac      -     -ag     -ac   UUAA     ---------A       -   -    aaagaa 

Annotation confidence Low

Genome context

dbj|BSVE01000024.1|: 13345686-13345817 [-]

Mature bmo-miR-3325-5p

• Accession: MIMAT0053260
• Description: Bombyx mori bmo-miR-3325-5p mature miRNA
• Sequence: 33 - UAUAUCUGAAGCAAGUA - 49
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-3325-3p

• Accession: MIMAT0015512
• Description: Bombyx mori bmo-miR-3325-3p mature miRNA
• Sequence: 88 - UUACUUGAGGAUAAAUU - 104
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415