miRBase entry: bmo-mir-3326

Stem-loop bmo-mir-3326


Accession
MI0014384
Description
Bombyx mori bmo-mir-3326 precursor miRNA


Sequence

2374 reads, 38.0 reads per million, 34 experiments
ugaguggacugUAGGUUUUGUGGUUCUUGUGAAAUAuaaacacuuuaucacuauuacuggguguuuauugguauuuauagaaagUACAAAGGUUUUUACAGGCACA
...(((..((((((((((((((.((.(((((((..((((((((((.............)))))))))).....))))))).)).)))))))...))))))).))).

Structure
uga   ga       ---       G  C       ---AU          uauca 
   gug  cugUAGG   UUUUGUG UU UUGUGAA     Auaaacacuu     c
   |||  |||||||   ||||||| || |||||||     ||||||||||     u
   CAC  GACAUUU   GAAACAU aa gauauuu     uauuuguggg     a
--A   -G       UUG       g  a       auggu          ucauu 


Annotation confidence Low
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Genome context
dbj|BSVE01000024.1|: 13327730-13327835 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bmo-mir-3326
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bmo-miR-3326-5p

Accession MIMAT0015513
Description Bombyx mori bmo-miR-3326-5p mature miRNA
Sequence 12 - UAGGUUUUGUGGUUCUUGUGAAAUA - 36
Evidence experimental
SOLID [1]

Mature bmo-miR-3326-3p

Accession MIMAT0053261
Description Bombyx mori bmo-miR-3326-3p mature miRNA
Sequence 85 - UACAAAGGUUUUUACAGGCACA - 106
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415