miRBase entry: bmo-mir-3326

Stem-loop bmo-mir-3326


Accession
MI0014384
Description
Bombyx mori bmo-mir-3326 precursor miRNA


Sequence

25 reads, 8 reads per million, 3 experiments
ugaguggacugUAGGUUUUGUGGUUCUUGUGAAAUAuaaacacuuuaucacuauuacuggguguuuauugguauuuauagaaaguacaaagguuuuuacaggcaca
...(((..((((((((((((((.((.(((((((..((((((((((.............)))))))))).....))))))).)).)))))))...))))))).))).

Structure
uga   ga       ---       G  C       ---AU          uauca 
   gug  cugUAGG   UUUUGUG UU UUGUGAA     Auaaacacuu     c
   |||  |||||||   ||||||| || |||||||     ||||||||||     u
   cac  gacauuu   gaaacau aa gauauuu     uauuuguggg     a
--a   -g       uug       g  a       auggu          ucauu 


Annotation confidence Not enough data
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Genome context
NW_004581808.1: 172351-172456 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bmo-mir-3326
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bmo-miR-3326

Accession MIMAT0015513
Description Bombyx mori bmo-miR-3326 mature miRNA
Sequence 12 - UAGGUUUUGUGGUUCUUGUGAAAUA - 36
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415