Stem-loop bmo-mir-3328

Accession

MI0014386

Description

Bombyx mori bmo-mir-3328 precursor miRNA

Sequence

15 reads, 8 reads per million, 3 experiments

uccagauuggagaggaccauggagauguagaagaauugaugaucccuucauccaacauuuuagaaauuugggauuggacuucuUGUUUGUGCACUUCAGGGAAUCUAUaugauuuu
.(((...)))(((...((.(((((.((((.(((....((.(.(((..((..((((.((((...))))))))))..)))).))...))).)))))))))))...)))..........

Structure

uccagauugg   gga  a     a    g   aauu  u a   cu  au    c    u 
          aga   cc uggag ugua aag    ga g ucc  uc  ccaa auuu  
          |||   || ||||| |||| |||    || | |||  ||  |||| |||| a
          UCU   GG ACUUC ACGU UUU    cu c agg  ag  gguu uaaa  
uuuuaguaUA   AAG  -     -    G   -GUu  u -   uu  --    -    g 

Annotation confidence Not enough data

Genome context

NW_004581808.1: 308156-308271 [+]

Mature bmo-miR-3328

• Accession: MIMAT0015516
• Description: Bombyx mori bmo-miR-3328 mature miRNA
• Sequence: 84 - UGUUUGUGCACUUCAGGGAAUCUAU - 108
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415