miRBase entry: bmo-mir-3330

Dead hairpin entry

Stem-loop bmo-mir-3330


Accession
MI0014388
Description
Bombyx mori bmo-mir-3330 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

31382 reads, 902.0 reads per million, 26 experiments
uuUCAGUACCCCAUCUCGCGACGCGCUaucgacgcgucacuuucggggugucccUUGAUCUGUAUGUUACCGUAGUGAAAGCgcuccacgaauuguuccuauuggu
..((((((...((..(((.(..(((((.((((((.((.((..((((((....)))))).......)).)))))..))).)))))..).)))..))....)))))).

Structure
uu      -CCC  UC   C AC     a   --   c  c  -----uu      u 
  UCAGUA    CA  UCG G  GCGCU ucg  acg gu ac       ucgggg g
  ||||||    ||  ||| |  ||||| |||  ||| || ||       ||||||  
  gguuau    gu  agc c  cgCGA AGU  UGC CA UG       AGUUcc u
-u      ccuu  ua   a cu     A   GA   -  U  UAUGUCU      c