Stem-loop bmo-mir-3330

Accession

MI0014388

Description

Bombyx mori bmo-mir-3330 precursor miRNA

Sequence

31382 reads, 902.0 reads per million, 26 experiments

uuUCAGUACCCCAUCUCGCGACGCGCUaucgacgcgucacuuucggggugucccUUGAUCUGUAUGUUACCGUAGUGAAAGCgcuccacgaauuguuccuauuggu
..((((((...((..(((.(..(((((.((((((.((.((..((((((....)))))).......)).)))))..))).)))))..).)))..))....)))))).

Structure

uu      -CCC  UC   C AC     a   --   c  c  -----uu      u 
  UCAGUA    CA  UCG G  GCGCU ucg  acg gu ac       ucgggg g
  ||||||    ||  ||| |  ||||| |||  ||| || ||       ||||||  
  gguuau    gu  agc c  cgCGA AGU  UGC CA UG       AGUUcc u
-u      ccuu  ua   a cu     A   GA   -  U  UAUGUCU      c 

Annotation confidence Low

Genome context

dbj|BSVE01000011.1|: 18321161-18321266 [-]

Mature bmo-miR-3330-5p

• Accession: MIMAT0053264
• Description: Bombyx mori bmo-miR-3330-5p mature miRNA
• Sequence: 3 - UCAGUACCCCAUCUCGCGACGCGCU - 27
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-3330-3p

• Accession: MIMAT0015518
• Description: Bombyx mori bmo-miR-3330-3p mature miRNA
• Sequence: 55 - UUGAUCUGUAUGUUACCGUAGUGAAAGC - 82
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415