miRBase entry: bmo-mir-3332

Stem-loop bmo-mir-3332


Accession
MI0014390
Description
Bombyx mori bmo-mir-3332 precursor miRNA


Sequence

18080 reads, 572.0 reads per million, 24 experiments
cacugaccccgCUCAGCGAGCAACCUGGCCUcggugcgagcgaggaggucgauuuccucgccaugccaccgccgcuUCACCAUCAUCGGAGCGGCAUCCGUA
.((.((..((((((..(((.......(((..(((((((.((((((((......))))))))..)).)))))..))).........)))))))))..)).)).

Structure
c  u  cc      AG   --GCAACCU   CU     -  -a        gu 
 ac ga  ccgCUC  CGA         GGC  cggug cg  gcgaggag  c
 || ||  ||||||  |||         |||  ||||| ||  ||||||||   
 UG CU  GGCGAG  GCU         ucg  gccac gu  cgcuccuu  g
A  C  AC      --   ACUACCACU   cc     c  ac        ua 


Annotation confidence Low
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Genome context
dbj|BSVE01000011.1|: 4507760-4507861 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from bmo-mir-3332
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bmo-miR-3332-5p

Accession MIMAT0053265
Description Bombyx mori bmo-miR-3332-5p mature miRNA
Sequence 12 - CUCAGCGAGCAACCUGGCCU - 31
Evidence experimental
SOLID [1]

Mature bmo-miR-3332-3p

Accession MIMAT0015519
Description Bombyx mori bmo-miR-3332-3p mature miRNA
Sequence 77 - UCACCAUCAUCGGAGCGGCAUCCGUA - 102
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415