miRBase entry: bmo-mir-3335

Stem-loop bmo-mir-3335


Accession
MI0014393
Description
Bombyx mori bmo-mir-3335 precursor miRNA


Sequence

aagucgucgaauuauaUGAGCCGUGUCCGUACCGCUUUCAgguugguuacaauaagcaguuaauguuuuauaauguuccauuuaaaagugguucuugaauauccgucuaauaucaacgucgau
..((((.((...(((..((...((((.((.((((((((.((((.((..(((..(((((.....))))).....))).)))))).))))))))...)).))))...))..)))....)).))))

Structure
aa    u  -aau   aU  GCC    C  --U        C    u  uu   ---au     g 
  gucg cg    uau  GA   GUGU CG   ACCGCUUU Aggu gg  aca     aagca u
  |||| ||    |||  ||   |||| ||   |||||||| |||| ||  |||     ||||| u
  uagc gc    aua  cu   uaua gu   uggugaaa uuua cc  ugu     uuugu a
--    u  aacu   au  gcc    a  ucu        a    -  -u   aauau     a 


Annotation confidence Not enough data
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Genome context
NW_004582024.1: 4983561-4983683 [+]

Database links

Mature bmo-miR-3335

Accession MIMAT0015522
Description Bombyx mori bmo-miR-3335 mature miRNA
Sequence 17 - UGAGCCGUGUCCGUACCGCUUUCA - 40
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415