miRBase entry: bmo-mir-3337

Stem-loop bmo-mir-3337


Accession
MI0014395
Description
Bombyx mori bmo-mir-3337 precursor miRNA


Sequence

14589 reads, 291.0 reads per million, 30 experiments
gagcaccuucgccUCCAUAUCCGUGCUCGGACGCUUgggugcgacucuauugcgaugugcuccuucaccagucuguccaaggccucuucgcgcaUCGAUACAUGGGCGCAGGUGA
...(((((.(((((...((((.((((.((((.((((.((.((((((.....((.....)).........)))).)))).))))...)))).)))).))))...))))).))))).

Structure
gag     u     CCA    C    U    --C    g  u  -    ----cuauu  g 
   caccu cgccU   UAUC GUGC CGGA   GCUU gg gc gacu         gc a
   ||||| |||||   |||| |||| ||||   |||| || || ||||         || u
   GUGGA GCGGG   AUAG Uacg gcuu   cgga cc ug cuga         cg g
--A     C     UAC    C    c    cuc    a  -  u    ccacuuccu  u 


Annotation confidence Low
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Genome context
dbj|BSVE01000023.1|: 1646437-1646551 [+]

Database links

Mature bmo-miR-3337-5p

Accession MIMAT0015524
Description Bombyx mori bmo-miR-3337-5p mature miRNA
Sequence 14 - UCCAUAUCCGUGCUCGGACGCUU - 36
Evidence experimental
SOLID [1]

Mature bmo-miR-3337-3p

Accession MIMAT0053268
Description Bombyx mori bmo-miR-3337-3p mature miRNA
Sequence 95 - UCGAUACAUGGGCGCAGGUGA - 115
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415