miRBase entry: bmo-mir-3339

Stem-loop bmo-mir-3339


Accession
MI0014397
Description
Bombyx mori bmo-mir-3339 precursor miRNA


Sequence

7 reads, 2 reads per million, 3 experiments
ugguuuuUAGACUUUUUAGAUGUUGGUCAAgcucgugaucuguguccgaucauuccgacauguugaccgauuaauuagaaauugucc
.........((((((((((..(((((((((..((((((((.......)))))...)))....)))))))))...)))))))..))).

Structure
ugguuuuUA   --       -AU         --gc   ---     ug 
         GAC  UUUUUAG   GUUGGUCAA    ucg   ugauc  u
         |||  |||||||   |||||||||    |||   |||||  g
         cug  aaagauu   uagccaguu    agc   acuag  u
--------c   uu       aau         guac   cuu     cc 


Annotation confidence Not enough data
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Genome context
NW_004582054.1: 14179-14265 [+]

Database links

Mature bmo-miR-3339

Accession MIMAT0015527
Description Bombyx mori bmo-miR-3339 mature miRNA
Sequence 8 - UAGACUUUUUAGAUGUUGGUCAA - 30
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415