Stem-loop bmo-mir-3339

Accession

MI0014397

Description

Bombyx mori bmo-mir-3339 precursor miRNA

Sequence

2030 reads, 43.0 reads per million, 32 experiments

ugguuUUUAGACUUUUUAGAUGUUGGUCAAGCUcgugaucuguguccgaUCAUUCCGACAUGUUGACCGAUUAAuuagaaauugucc
.........((((((((((..(((((((((..((((((((.......)))))...)))....)))))))))...)))))))..))).

Structure

ugguuUUUA   --       -AU         --GC   ---     ug 
         GAC  UUUUUAG   GUUGGUCAA    Ucg   ugauc  u
         |||  |||||||   |||||||||    |||   |||||  g
         cug  aaagauu   UAGCCAGUU    AGC   ACUag  u
--------c   uu       AAU         GUAC   CUU     cc 

Annotation confidence Low

Genome context

dbj|BSVE01000014.1|: 382261-382347 [+]

Mature bmo-miR-3339-5p

• Accession: MIMAT0015527
• Description: Bombyx mori bmo-miR-3339-5p mature miRNA
• Sequence: 6 - UUUAGACUUUUUAGAUGUUGGUCAAGCU - 33
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-3339-3p

• Accession: MIMAT0053269
• Description: Bombyx mori bmo-miR-3339-3p mature miRNA
• Sequence: 50 - UCAUUCCGACAUGUUGACCGAUUAA - 74
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415