miRBase entry: bmo-mir-3339

Dead hairpin entry

Stem-loop bmo-mir-3339


Accession
MI0014397
Description
Bombyx mori bmo-mir-3339 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

2030 reads, 43.0 reads per million, 32 experiments
ugguuUUUAGACUUUUUAGAUGUUGGUCAAGCUcgugaucuguguccgaUCAUUCCGACAUGUUGACCGAUUAAuuagaaauugucc
.........((((((((((..(((((((((..((((((((.......)))))...)))....)))))))))...)))))))..))).

Structure
ugguuUUUA   --       -AU         --GC   ---     ug 
         GAC  UUUUUAG   GUUGGUCAA    Ucg   ugauc  u
         |||  |||||||   |||||||||    |||   |||||  g
         cug  aaagauu   UAGCCAGUU    AGC   ACUag  u
--------c   uu       AAU         GUAC   CUU     cc