miRBase entry: bmo-mir-3343

Stem-loop bmo-mir-3343


Accession
MI0014401
Description
Bombyx mori bmo-mir-3343 precursor miRNA


Sequence

reads, None reads per million, experiments
gacuccuuggcaauUCUCCAUCGUUCCUGCACCGUAGCucccuuguauaucggacagucguacaacgggugcccuuccuugcauugcgggcacgccggcuugucu
........(((((....((..(((.((((((..(((((.(((((((((..(.....)..)))))).))).)).......)))..)))))).)))..)).))))).

Structure
gacuccuu     uUCU  AU   U      CC   -------  u   -      au g 
        ggcaa    CC  CGU CCUGCA  GUA       GC ccc uuguau  c g
        |||||    ||  ||| ||||||  |||       || ||| ||||||  | a
        cuguu    gg  gca gggcgu  cgu       cg ggg aacaug  g c
-------u     ---c  cc   c      ua   uccuucc  u   c      cu a 


Annotation confidence Not enough data
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Genome context
NW_004618581.1: 445-549 [+]

Database links

Mature bmo-miR-3343

Accession MIMAT0015530
Description Bombyx mori bmo-miR-3343 mature miRNA
Sequence 15 - UCUCCAUCGUUCCUGCACCGUAGC - 38
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415