miRBase entry: bmo-mir-3345

Dead hairpin entry

Stem-loop bmo-mir-3345


Accession
MI0014403
Description
Bombyx mori bmo-mir-3345 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

65691 reads, 1252.0 reads per million, 34 experiments
cuaugccaauUAUCGUUACGCGCGUCGCUUAGGcgggaguggacuucgcguuguagacgacgcauccgaauucuguuugaaugcgugggaAGACGAUCGUAGGCCCGGA
((..(((.((.((((((.(.((((.((.((((((((((.((((....((((((....)))))).))))..)))))))))).)))))).)..)))))).)).)))..)).

Structure
-  au   a  U      -A G    U  C          -g    cuuc      u 
 cu  gcc au AUCGUU  C CGCG CG UUAGGcggga  ugga    gcguug a
 ||  ||| || ||||||  | |||| || ||||||||||  ||||    ||||||  
 GG  CGG UG UAGCAG  g gugc gu aguuugucuu  gccu    cgcagc g
A  CC   A  C      Aa g    -  a          aa    ---a      a