Stem-loop bmo-mir-3345

Accession

MI0014403

Description

Bombyx mori bmo-mir-3345 precursor miRNA

Sequence

65691 reads, 1252.0 reads per million, 34 experiments

cuaugccaauUAUCGUUACGCGCGUCGCUUAGGcgggaguggacuucgcguuguagacgacgcauccgaauucuguuugaaugcgugggaAGACGAUCGUAGGCCCGGA
((..(((.((.((((((.(.((((.((.((((((((((.((((....((((((....)))))).))))..)))))))))).)))))).)..)))))).)).)))..)).

Structure

-  au   a  U      -A G    U  C          -g    cuuc      u 
 cu  gcc au AUCGUU  C CGCG CG UUAGGcggga  ugga    gcguug a
 ||  ||| || ||||||  | |||| || ||||||||||  ||||    ||||||  
 GG  CGG UG UAGCAG  g gugc gu aguuugucuu  gccu    cgcagc g
A  CC   A  C      Aa g    -  a          aa    ---a      a 

Annotation confidence Low

Genome context

dbj|BSVE01000030.1|: 10764879-10764987 [-]

Mature bmo-miR-3345-5p

• Accession: MIMAT0015532
• Description: Bombyx mori bmo-miR-3345-5p mature miRNA
• Sequence: 11 - UAUCGUUACGCGCGUCGCUUAGG - 33
• Evidence: experimental ; SOLID [1]

Mature bmo-miR-3345-3p

• Accession: MIMAT0053273
• Description: Bombyx mori bmo-miR-3345-3p mature miRNA
• Sequence: 91 - AGACGAUCGUAGGCCCGGA - 109
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415