Stem-loop bmo-mir-3345

Accession

MI0014403

Description

Bombyx mori bmo-mir-3345 precursor miRNA

Sequence

301 reads, 96 reads per million, 3 experiments

cuaugccaauUAUCGUUACGCGCGUCGCUUAGGcgggaguggacuucgcguuguagacgacgcauccgaauucuguuugaaugcgugggaagacgaucguaggcccgga
((..(((.((.((((((.(.((((.((.((((((((((.((((....((((((....)))))).))))..)))))))))).)))))).)..)))))).)).)))..)).

Structure

-  au   a  U      -A G    U  C          -g    cuuc      u 
 cu  gcc au AUCGUU  C CGCG CG UUAGGcggga  ugga    gcguug a
 ||  ||| || ||||||  | |||| || ||||||||||  ||||    ||||||  
 gg  cgg ug uagcag  g gugc gu aguuugucuu  gccu    cgcagc g
a  cc   a  c      aa g    -  a          aa    ---a      a 

Annotation confidence Not enough data

Genome context

NW_004582285.1: 2692-2800 [+]

Mature bmo-miR-3345

• Accession: MIMAT0015532
• Description: Bombyx mori bmo-miR-3345 mature miRNA
• Sequence: 11 - UAUCGUUACGCGCGUCGCUUAGG - 33
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415