miRBase entry: bmo-mir-3347a

Dead hairpin entry

Stem-loop bmo-mir-3347a


Accession
MI0014405
Description
Bombyx mori bmo-mir-3347a precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

1001 reads, 25.0 reads per million, 25 experiments
gcggagauuuaucuaaacuugugggaccuguucuguuuaguauguaugcggcgguauuaaugagcucugcccauagcacuugcgguaauggcucaugagcgUACAUCAUUGAUCUUGCUGUCUCAAcuaggguucuguucuccc
..(((((...((((.......((((((..((.....(((((((((((((..........(((((((.((((((.......)).))))..)))))))..)))))))).)))))....)).))))))....)))).....))))).

Structure
gc     --uuu    aaacuug      cu  ucugu     -        ggcgguauua       -c    -  ua 
  ggaga     aucu       ugggac  gu     uuagu auguaugc          augagcu  ugcc ca  g
  |||||     ||||       ||||||  ||     ||||| ||||||||          |||||||  |||| ||  c
  ccucu     uggg       ACUCUG  CG     AGUUA UACAUgcg          uacucgg  augg gu  a
-c     ugucu    ---aucA      -U  -UUCU     C        --------ag       ua    c  uc